mouse coronal brain matrices Search Results


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mouse brain slicer acrylic brain matrix coronal 40–75 g  (Stoelting inc)
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coronal mouse atlas  (Allen Institute for Brain Science)
90
Allen Institute for Brain Science coronal mouse atlas
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Coronal Mouse Atlas, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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mouse coronal brain sections  (Abbomax Inc)
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Abbomax Inc mouse coronal brain sections
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Mouse Coronal Brain Sections, supplied by Abbomax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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mouse coronal brain matrices  (Applied Scientific Instrumentation Inc)
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Applied Scientific Instrumentation Inc mouse coronal brain matrices
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Mouse Coronal Brain Matrices, supplied by Applied Scientific Instrumentation Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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alto brain matrix stainless steel mouse coronal 45–75 g  (Harvard Bioscience)
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Harvard Bioscience alto brain matrix stainless steel mouse coronal 45–75 g
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Alto Brain Matrix Stainless Steel Mouse Coronal 45–75 G, supplied by Harvard Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pre-cooled mouse brain matrice  (RWD Life Science)
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RWD Life Science pre-cooled mouse brain matrice
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Pre Cooled Mouse Brain Matrice, supplied by RWD Life Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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coronal mouse brain reference atlas images overlays  (Allen Institute for Brain Science)
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Allen Institute for Brain Science coronal mouse brain reference atlas images overlays
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Coronal Mouse Brain Reference Atlas Images Overlays, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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coronal mouse brain slicer  (Visikol inc)
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Visikol inc coronal mouse brain slicer
Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for <t>Brain</t> Science <t>coronal</t> <t>mouse</t> <t>atlas</t> which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.
Coronal Mouse Brain Slicer, supplied by Visikol inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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p56 mouse brain coronal section  (Allen Institute for Brain Science)
90
Allen Institute for Brain Science p56 mouse brain coronal section
a Annotation of <t>P56</t> mouse brain coronal sections from the Allen Brain Atlas. b Manual annotation of tissue from P22 mouse brain coronal sections in Zhang et al., overlaid on the image from a . c Comparison of domain segmentation results from five algorithms. Note that SpaMultiVAE was excluded as it is not designed for ATAC-RNA multi-omics data analysis. d Distribution of modality weights for RNA and ATAC in COSMOS analysis. e UMAP visualizations of integrated embeddings produced by SpatialGlue and COSMOS. f Pseudo-spatiotemporal maps (pSM) generated by SpatialGlue and COSMOS. ( g) Gene Ontology Biological Process (GOBP) analysis of genes associated with pseudo-time. h Gene expression profiles for the top 15 positive and 15 negative pSM-associated genes. i Spatial mapping of gene expressions for brain development genes negatively ( Nexn, Bcl11b, Mbp ) and positively ( Nfix, Mef2c, Cux2 ) correlated with pseudo-time, as identified by COSMOS. The full names of the abbreviations of brain regions are: nucleus accumbens (ACB), caudoputamen (CP), lateral ventricle (VL), genu of corpus callosum (ccg) and anterior commissure olfactory limb (aco). Source data are provided as a Source Data file.
P56 Mouse Brain Coronal Section, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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blank mouse plasma and brain matrices  (Neuropore Therapies)
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Neuropore Therapies blank mouse plasma and brain matrices
a Annotation of <t>P56</t> mouse brain coronal sections from the Allen Brain Atlas. b Manual annotation of tissue from P22 mouse brain coronal sections in Zhang et al., overlaid on the image from a . c Comparison of domain segmentation results from five algorithms. Note that SpaMultiVAE was excluded as it is not designed for ATAC-RNA multi-omics data analysis. d Distribution of modality weights for RNA and ATAC in COSMOS analysis. e UMAP visualizations of integrated embeddings produced by SpatialGlue and COSMOS. f Pseudo-spatiotemporal maps (pSM) generated by SpatialGlue and COSMOS. ( g) Gene Ontology Biological Process (GOBP) analysis of genes associated with pseudo-time. h Gene expression profiles for the top 15 positive and 15 negative pSM-associated genes. i Spatial mapping of gene expressions for brain development genes negatively ( Nexn, Bcl11b, Mbp ) and positively ( Nfix, Mef2c, Cux2 ) correlated with pseudo-time, as identified by COSMOS. The full names of the abbreviations of brain regions are: nucleus accumbens (ACB), caudoputamen (CP), lateral ventricle (VL), genu of corpus callosum (ccg) and anterior commissure olfactory limb (aco). Source data are provided as a Source Data file.
Blank Mouse Plasma And Brain Matrices, supplied by Neuropore Therapies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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mouse brain matrices  (Bio Research Center Co Ltd)
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Bio Research Center Co Ltd mouse brain matrices
a Annotation of <t>P56</t> mouse brain coronal sections from the Allen Brain Atlas. b Manual annotation of tissue from P22 mouse brain coronal sections in Zhang et al., overlaid on the image from a . c Comparison of domain segmentation results from five algorithms. Note that SpaMultiVAE was excluded as it is not designed for ATAC-RNA multi-omics data analysis. d Distribution of modality weights for RNA and ATAC in COSMOS analysis. e UMAP visualizations of integrated embeddings produced by SpatialGlue and COSMOS. f Pseudo-spatiotemporal maps (pSM) generated by SpatialGlue and COSMOS. ( g) Gene Ontology Biological Process (GOBP) analysis of genes associated with pseudo-time. h Gene expression profiles for the top 15 positive and 15 negative pSM-associated genes. i Spatial mapping of gene expressions for brain development genes negatively ( Nexn, Bcl11b, Mbp ) and positively ( Nfix, Mef2c, Cux2 ) correlated with pseudo-time, as identified by COSMOS. The full names of the abbreviations of brain regions are: nucleus accumbens (ACB), caudoputamen (CP), lateral ventricle (VL), genu of corpus callosum (ccg) and anterior commissure olfactory limb (aco). Source data are provided as a Source Data file.
Mouse Brain Matrices, supplied by Bio Research Center Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for Brain Science coronal mouse atlas which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.

Journal: Cerebral Cortex (New York, NY)

Article Title: A Layer-specific Corticofugal Input to the Mouse Superior Colliculus

doi: 10.1093/cercor/bhx161

Figure Lengend Snippet: Areal characterization of cortico-superior-collicular neurons. (a) Epifluorescence images show retrogradely labeled neurons in a series of slices containing the AC. Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. (b) Schematic from the Allen Institute for Brain Science coronal mouse atlas which was used to reference the boundaries between the cortical areas. (c) Continuing in series from panel a. (d) Continuing in series from panel b.

Article Snippet: Dashed yellow lines indicate areal boundaries between the dorsal, primary, and ventral AC. ( b ) Schematic from the Allen Institute for Brain Science coronal mouse atlas which was used to reference the boundaries between the cortical areas. ( c ) Continuing in series from panel a. ( d ) Continuing in series from panel b.

Techniques: Labeling

a Annotation of P56 mouse brain coronal sections from the Allen Brain Atlas. b Manual annotation of tissue from P22 mouse brain coronal sections in Zhang et al., overlaid on the image from a . c Comparison of domain segmentation results from five algorithms. Note that SpaMultiVAE was excluded as it is not designed for ATAC-RNA multi-omics data analysis. d Distribution of modality weights for RNA and ATAC in COSMOS analysis. e UMAP visualizations of integrated embeddings produced by SpatialGlue and COSMOS. f Pseudo-spatiotemporal maps (pSM) generated by SpatialGlue and COSMOS. ( g) Gene Ontology Biological Process (GOBP) analysis of genes associated with pseudo-time. h Gene expression profiles for the top 15 positive and 15 negative pSM-associated genes. i Spatial mapping of gene expressions for brain development genes negatively ( Nexn, Bcl11b, Mbp ) and positively ( Nfix, Mef2c, Cux2 ) correlated with pseudo-time, as identified by COSMOS. The full names of the abbreviations of brain regions are: nucleus accumbens (ACB), caudoputamen (CP), lateral ventricle (VL), genu of corpus callosum (ccg) and anterior commissure olfactory limb (aco). Source data are provided as a Source Data file.

Journal: Nature Communications

Article Title: Cooperative integration of spatially resolved multi-omics data with COSMOS

doi: 10.1038/s41467-024-55204-y

Figure Lengend Snippet: a Annotation of P56 mouse brain coronal sections from the Allen Brain Atlas. b Manual annotation of tissue from P22 mouse brain coronal sections in Zhang et al., overlaid on the image from a . c Comparison of domain segmentation results from five algorithms. Note that SpaMultiVAE was excluded as it is not designed for ATAC-RNA multi-omics data analysis. d Distribution of modality weights for RNA and ATAC in COSMOS analysis. e UMAP visualizations of integrated embeddings produced by SpatialGlue and COSMOS. f Pseudo-spatiotemporal maps (pSM) generated by SpatialGlue and COSMOS. ( g) Gene Ontology Biological Process (GOBP) analysis of genes associated with pseudo-time. h Gene expression profiles for the top 15 positive and 15 negative pSM-associated genes. i Spatial mapping of gene expressions for brain development genes negatively ( Nexn, Bcl11b, Mbp ) and positively ( Nfix, Mef2c, Cux2 ) correlated with pseudo-time, as identified by COSMOS. The full names of the abbreviations of brain regions are: nucleus accumbens (ACB), caudoputamen (CP), lateral ventricle (VL), genu of corpus callosum (ccg) and anterior commissure olfactory limb (aco). Source data are provided as a Source Data file.

Article Snippet: The reference of mouse brain ATAC-RNA data is obtained from a P56 mouse brain coronal section from Allen Mouse Brain Atlas (Allen Institute for Brain Science: https://mouse.brain-map.org/static/atlas ).

Techniques: Comparison, Biomarker Discovery, Produced, Generated, Gene Expression